Package com.compomics.util.gui.parameters.identification

Interface IdentificationAlgorithmParameter

All Known Implementing Classes:
AndromedaParameters, CometParameters, DirecTagParameters, MetaMorpheusParameters, MsAmandaParameters, MsgfParameters, MyriMatchParameters, NovorParameters, OmssaParameters, PepnovoParameters, PNovoParameters, SageParameters, TideParameters, XtandemParameters
public interface IdentificationAlgorithmParameter
Interface for the algorithm specific parameters.
Author:
Marc Vaudel

  • Method Summary

    Modifier and Type
    Method
    Description
    boolean
    equals(IdentificationAlgorithmParameter identificationAlgorithmParameter)
    Indicates whether another identificationAlgorithmParameter has the same parameters.
    Advocate
    getAlgorithm()
    Returns the identification algorithm.
    String
    toString(boolean html)
    Returns the parameters as a string.

  • Method Details

    • getAlgorithm

      Advocate getAlgorithm()
      Returns the identification algorithm.
      Returns:
      the identification algorithm

    • equals

      boolean equals(IdentificationAlgorithmParameter identificationAlgorithmParameter)
      Indicates whether another identificationAlgorithmParameter has the same parameters.
      Parameters:
      identificationAlgorithmParameter - the other identificationAlgorithmParameter
      Returns:
      true if the algorithm and parameters are the same

    • toString

      String toString(boolean html)
      Returns the parameters as a string.
      Parameters:
      html - use HTML formatting
      Returns:
      the parameters as a string