Package com.compomics.util.gui.parameters.identification.advanced

package com.compomics.util.gui.parameters.identification.advanced

Dialogs for advanced identification parameters.

Related Packages

Package	Description
com.compomics.util.gui.parameters.identification	GUI classes for parameters, settings and preferences used for identification.
com.compomics.util.gui.parameters.identification.algorithm	Search algorithm settings dialogs.
com.compomics.util.gui.parameters.identification.pride	Dialogs for pride reprocessing parameters.
com.compomics.util.gui.parameters.identification.search	Dialogs for search parameters.

Classes

Class	Description
AnnotationParametersDialog	A simple dialog for setting the spectrum annotation preferences.
BackgroundSpeciesDialog	Dialog for editing the background species.
FractionParametersDialog	FractionSettingsDialog.
GeneParametersDialog	Dialog for editing the Gene Mapping Preferences.
MatchesImportParametersDialog	The PeptideShaker import settings dialog.
ModificationLocalizationParametersDialog	PTMLocalizationParametersDialog.
PeptideVariantsParametersDialog	FractionSettingsDialog.
ProteinInferenceParametersDialog	Dialog for the edition of the protein inference settings.
PsmScoringParametersDialog	Dialog for the edition of the PSM scoring settings.
SequenceMatchingParametersDialog	Dialog for the edition of the sequence matching settings.
ValidationParametersDialog	Dialog for the edition of the sequence matching settings
ValidationQCParametersDialog	Dialog for the edition of validation QC filters.