Package com.compomics.util.io

Class PklFile

java.lang.Object
com.compomics.util.io.PklFile
public class PklFile extends Object
Contains information about the contents of one PKL file.
Author:
Harald Barsnes

  • Constructor Details

    • PklFile

      public PklFile()
      Empty default constructor

    • PklFile

      public PklFile(File pklFile) throws IOException
      Parse a PKL file and store the details in the PKLFile object.
      Parameters:
      pklFile - the file to parse
      Throws:
      IOException - if an IOException occurs

  • Method Details

    • getPrecurorCharge

      public int getPrecurorCharge()
      Returns:
      the precurorCharge

    • setPrecurorCharge

      public void setPrecurorCharge(int precurorCharge)
      Parameters:
      precurorCharge - the precurorCharge to set

    • getPrecursorMz

      public double getPrecursorMz()
      Returns:
      the precursorMz

    • setPrecursorMz

      public void setPrecursorMz(double precursorMz)
      Parameters:
      precursorMz - the precursorMz to set

    • getPrecursorIntensity

      public double getPrecursorIntensity()
      Returns:
      the precursorIntensity

    • setPrecursorIntensity

      public void setPrecursorIntensity(double precursorIntensity)
      Parameters:
      precursorIntensity - the precursorIntensity to set

    • getMzValues

      public double[] getMzValues()
      Returns:
      the mzValues

    • setMzValues

      public void setMzValues(double[] mzValues)
      Parameters:
      mzValues - the mzValues to set

    • getIntensityValues

      public double[] getIntensityValues()
      Returns:
      the intensityValues

    • setIntensityValues

      public void setIntensityValues(double[] intensityValues)
      Parameters:
      intensityValues - the intensityValues to set

    • getFileName

      public String getFileName()
      Returns:
      the fileName

    • setFileName

      public void setFileName(String fileName)
      Parameters:
      fileName - the fileName to set

    • getSpectrumFileId

      public String getSpectrumFileId()
      Returns:
      the spectrumFileId

    • setSpectrumFileId

      public void setSpectrumFileId(String spectrumFileId)
      Parameters:
      spectrumFileId - the spectrumFileId to set