Uses of Class
com.compomics.util.parameters.tools.ProcessingParameters

Packages that use ProcessingParameters

Package	Description
com.compomics.util.experiment.quantification.spectrumcounting	Experiment classes related to spectrum counting.
com.compomics.util.gui.parameters.tools	GUI classes for parameters, settings and preferences used in tools.

Uses of ProcessingParameters in com.compomics.util.experiment.quantification.spectrumcounting

Methods in com.compomics.util.experiment.quantification.spectrumcounting with parameters of type ProcessingParameters

Modifier and Type	Method	Description
void	ScalingFactorsEstimators.estimateScalingFactors(Identification identification, Metrics metrics, SequenceProvider sequenceProvider, IdentificationFeaturesGenerator identificationFeaturesGenerator, WaitingHandler waitingHandler, ExceptionHandler exceptionHandler, ProcessingParameters processingParameters)	Estimates the scaling factors and stores them in the given metrics.

Uses of ProcessingParameters in com.compomics.util.gui.parameters.tools

Methods in com.compomics.util.gui.parameters.tools that return ProcessingParameters

Modifier and Type	Method	Description
ProcessingParameters	ProcessingParametersDialog.getProcessingParameters()	Returns the processing parameters as set by the user.

Constructors in com.compomics.util.gui.parameters.tools with parameters of type ProcessingParameters

Modifier	Constructor	Description
	ProcessingParametersDialog(Dialog owner, Frame parentFrame, ProcessingParameters processingPreferences, boolean editable)	Creates a new ProcessingPreferencesDialog with a dialog as owner.
	ProcessingParametersDialog(Frame parentFrame, ProcessingParameters processingPreferences, boolean editable)	Creates a new ProcessingPreferencesDialog with a frame as owner.