Package com.compomics.util.pdbfinder.das.readers

Class DasAnnotationServerAlingmentReader

java.lang.Object

com.compomics.util.pdbfinder.das.readers.DasAnnotationServerAlingmentReader

public class DasAnnotationServerAlingmentReader
extends Object

DasAnnotationServerAlingmentReader.

Author:

Niklaas Colaert, Yehia Farag, Harald Barsnes

Constructor Summary

Constructors

Constructor	Description
DasAnnotationServerAlingmentReader()	Empty default constructor.
DasAnnotationServerAlingmentReader(String aJson)	Creates a new reader for a json string.

Method Summary

Modifier and Type	Method	Description
DasAlignment[]	getAllAlignments()	Get all alignments in the json string.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

DasAnnotationServerAlingmentReader

public DasAnnotationServerAlingmentReader()

Empty default constructor.

DasAnnotationServerAlingmentReader

public DasAnnotationServerAlingmentReader(String aJson)

Creates a new reader for a json string.

Parameters:

aJson - the json string

Method Details

getAllAlignments

public DasAlignment[] getAllAlignments()

Get all alignments in the json string.

Returns:

all alignments in the json string