Uses of Class
com.compomics.util.pride.PtmToPrideMap

Packages that use PtmToPrideMap

Package	Description
com.compomics.util.gui.modification	PTM GUI dialogs.
com.compomics.util.pride	Objects related to mapping to PRIDE.

Uses of PtmToPrideMap in com.compomics.util.gui.modification

Constructors in com.compomics.util.gui.modification with parameters of type PtmToPrideMap

Modifier	Constructor	Description
	ModificationDialog(JFrame parent, PtmToPrideMap modificationToPrideMap, Modification currentModification, boolean editable)	Creates a new Modification dialog.

Uses of PtmToPrideMap in com.compomics.util.pride

Methods in com.compomics.util.pride that return PtmToPrideMap

Modifier and Type	Method	Description
PtmToPrideMap	PrideObjectsFactory.getPtmToPrideMap()	Returns the utilities PTM to pride map.
static PtmToPrideMap	PtmToPrideMap.loadPtmToPrideMap(SearchParameters searchParameters)	Deprecated. the CV term is now part of the PTM object

Methods in com.compomics.util.pride with parameters of type PtmToPrideMap

Modifier and Type	Method	Description
void	PrideObjectsFactory.setPtmToPrideMap(PtmToPrideMap ptmToPrideMap)	Sets a new PTM to PRIDE map.