Package com.compomics.util.pride.prideobjects

Class Reference

java.lang.Object

com.compomics.util.experiment.personalization.ExperimentObject

com.compomics.util.pride.prideobjects.Reference

All Implemented Interfaces:

PrideObject, Serializable

public class Reference
extends ExperimentObject
implements PrideObject

A simple publication reference object.

Author:

Harald Barsnes

See Also:

• Serialized Form

Field Summary

Fields inherited from class com.compomics.util.experiment.personalization.ExperimentObject

NO_KEY

Constructor Summary

Constructors

Constructor	Description
Reference()	Empty default constructor
Reference(String reference, String pmid, String doi)	Create a new Reference object.

Method Summary

Modifier and Type	Method	Description
String	getDoi()	Returns the Digital Object Identifier (DOI) of the reference.
String	getFileName()	Returns the name to use when serializing the object.
String	getPmid()	Returns the PubMed ID of the reference.
String	getReference()	Returns the reference as a string.
void	setDoi(String doi)	Set the Digital Object Identifier (DOI) of the reference.
void	setPmid(String pmid)	Set the PubMed ID of the reference.
void	setReference(String reference)	Set the reference.

Methods inherited from class com.compomics.util.experiment.personalization.ExperimentObject

addUrParam, asLong, clearParametersMap, getId, getUrParam, getUrParams, removeUrParam, setId, setUrParams

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

Reference

public Reference()

Empty default constructor

Reference

public Reference(String reference,
 String pmid,
 String doi)

Create a new Reference object.

Parameters:

reference - the reference

pmid - the PubMed ID

doi - the DOI

Method Details

getReference

public String getReference()

Returns the reference as a string.

Returns:

the reference

setReference

public void setReference(String reference)

Set the reference.

Parameters:

reference - the reference to set

getPmid

public String getPmid()

Returns the PubMed ID of the reference.

Returns:

the pmid

setPmid

public void setPmid(String pmid)

Set the PubMed ID of the reference.

Parameters:

pmid - the pmid to set

getDoi

public String getDoi()

Returns the Digital Object Identifier (DOI) of the reference.

Returns:

the doi

setDoi

public void setDoi(String doi)

Set the Digital Object Identifier (DOI) of the reference.

Parameters:

doi - the doi to set

getFileName

public String getFileName()

Description copied from interface: PrideObject

Returns the name to use when serializing the object.

Specified by:

getFileName in interface PrideObject

Returns:

the name to use when serializing the object