Uses of Package
com.compomics.util.protein

Packages that use com.compomics.util.protein

Package	Description
com.compomics.util.general	General, top-level tasks that are used throughout the other packages in the util section.
com.compomics.util.gui.spectrum	Spectrum and Chromatogram visualization GUI classes.
com.compomics.util.io	Classes related to input/output.
com.compomics.util.nucleotide	Useful objects for modeling and handling nucleotides.
com.compomics.util.protein	Classes concerning useful Objects and their operations for modeling and handling proteins.

Classes in com.compomics.util.protein used by com.compomics.util.general

Class	Description
MolecularFormula	This class represents the molecular formula.

Classes in com.compomics.util.protein used by com.compomics.util.gui.spectrum

Class	Description
AASequenceImpl	This class represents a sequence for a protein or peptide.

Classes in com.compomics.util.protein used by com.compomics.util.io

Class	Description
Enzyme	This class implements the functionality for an Enzyme.

Classes in com.compomics.util.protein used by com.compomics.util.nucleotide

Class	Description
AASequenceImpl	This class represents a sequence for a protein or peptide.
Protein	This class implements the behaviour for a Protein instance.

Classes in com.compomics.util.protein used by com.compomics.util.protein

Class	Description
AASequenceImpl	This class represents a sequence for a protein or peptide.
Enzyme	This class implements the functionality for an Enzyme.
ModificationTemplate	This class holds a template for a Modification, meaning that it contains all shared characteristics of a Modification, but not the instance-specific one.
MolecularFormula	This class represents the molecular formula.
Protein	This class implements the behaviour for a Protein instance.