Package eu.isas.peptideshaker

Class PeptideShakerWrapper

java.lang.Object
com.compomics.software.CompomicsWrapper
eu.isas.peptideshaker.PeptideShakerWrapper
public class PeptideShakerWrapper extends com.compomics.software.CompomicsWrapper
A wrapper class used to start the jar file with parameters. The parameters are read from the JavaOptions file in the Properties folder.
Author:
Harald Barsnes

  • Constructor Summary

    Constructors
    Constructor
    Description
    PeptideShakerWrapper()
    Starts the launcher by calling the launch method.
    PeptideShakerWrapper(String[] args)
    Starts the launcher by calling the launch method.

  • Method Summary

    Modifier and Type
    Method
    Description
    static void
    main(String[] args)
    Starts the launcher by calling the launch method.

    Methods inherited from class com.compomics.software.CompomicsWrapper

    appRunningIntoConda, checkForNewDeployedVersion, checkJavaVersion, downloadLatestVersion, getJarFilePath, getJavaHomeAndOptions, is64BitJava, launchTool, launchTool

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Constructor Details

    • PeptideShakerWrapper

      public PeptideShakerWrapper()
      Starts the launcher by calling the launch method. Use this as the main class in the jar file.

    • PeptideShakerWrapper

      public PeptideShakerWrapper(String[] args)
      Starts the launcher by calling the launch method. Use this as the main class in the jar file.
      Parameters:
      args - the command line arguments (ignored if null)

  • Method Details

    • main

      public static void main(String[] args)
      Starts the launcher by calling the launch method. Use this as the main class in the jar file.
      Parameters:
      args - the arguments