Package eu.isas.peptideshaker.followup

Class ProteoformExport

java.lang.Object
eu.isas.peptideshaker.followup.ProteoformExport
public class ProteoformExport extends Object
Export for PathwayMatcher.
Author:
Marc Vaudel, Harald Barsnes

  • Constructor Summary

    Constructors
    Constructor
    Description
    ProteoformExport()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    static void
    writeProteoforms(File destinationFile, com.compomics.util.experiment.identification.Identification identification, com.compomics.util.waiting.WaitingHandler waitingHandler)
    Writes an export with all the possible proteoforms of the validated proteins.

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Constructor Details

    • ProteoformExport

      public ProteoformExport()

  • Method Details

    • writeProteoforms

      public static void writeProteoforms(File destinationFile, com.compomics.util.experiment.identification.Identification identification, com.compomics.util.waiting.WaitingHandler waitingHandler)
      Writes an export with all the possible proteoforms of the validated proteins.
      Parameters:
      destinationFile - the destination file
      identification - the identification
      waitingHandler - the waiting handler