Uses of Enum
eu.isas.reporter.calculation.normalization.NormalizationType

Packages that use NormalizationType

Package	Description
eu.isas.reporter.calculation.normalization	Package containing classes used for the quantification.
eu.isas.reporter.cli	Package containing the CLI classes.
eu.isas.reporter.settings	Package containing the different settings.

Uses of NormalizationType in eu.isas.reporter.calculation.normalization

Methods in eu.isas.reporter.calculation.normalization that return NormalizationType

Modifier and Type	Method	Description
static NormalizationType	NormalizationType.getNormalizationType(int index)	Returns the normalization type corresponding to the given index.
static NormalizationType	NormalizationType.getNormalizationType(String name)	Returns the normalization type corresponding to the given name.
static NormalizationType	NormalizationType.valueOf(String name)	Returns the enum constant of this type with the specified name.
static NormalizationType[]	NormalizationType.values()	Returns an array containing the constants of this enum type, in the order they are declared.

Uses of NormalizationType in eu.isas.reporter.cli

Methods in eu.isas.reporter.cli that return NormalizationType

Modifier and Type	Method	Description
NormalizationType	ReporterCLIInputBean.getPeptideNormalizationType()	Returns the peptide normalization.
NormalizationType	ReporterCLIInputBean.getProteinNormalizationType()	Returns the protein normalization.
NormalizationType	ReporterCLIInputBean.getPsmNormalizationType()	Returns the PSM normalization.

Uses of NormalizationType in eu.isas.reporter.settings

Methods in eu.isas.reporter.settings that return NormalizationType

Modifier and Type	Method	Description
NormalizationType	NormalizationSettings.getPeptideNormalization()	Returns the type of normalization used to normalize the peptides.
NormalizationType	NormalizationSettings.getProteinNormalization()	Returns the type of normalization used to normalize the proteins.
NormalizationType	NormalizationSettings.getPsmNormalization()	Returns the type of normalization used to normalize the PSMs.

Methods in eu.isas.reporter.settings with parameters of type NormalizationType

Modifier and Type	Method	Description
void	NormalizationSettings.setPeptideNormalization(NormalizationType peptideNormalization)	Sets the type of normalization used to normalize the peptides.
void	NormalizationSettings.setProteinNormalization(NormalizationType proteinNormalization)	Sets the type of normalization used to normalize the proteins.
void	NormalizationSettings.setPsmNormalization(NormalizationType psmNormalization)	Sets the type of normalization used to normalize the PSMs.