Package eu.isas.reporter.calculation

package eu.isas.reporter.calculation

Package containing classes used for the calculation.

Related Packages

Package	Description
eu.isas.reporter	Main package.
eu.isas.reporter.calculation.clustering	Package containing classes used for the clustering.
eu.isas.reporter.calculation.normalization	Package containing classes used for the quantification.

Classes

Class	Description
CorrectionMatrix	A correction matrix contains the deisotoping coefficients as well as the labels to be corrected.
Deisotoper	This class takes care of the deisotoping of reporter ion intensities.
QuantificationFeaturesCache	The quantification features cache stores quantification features.
QuantificationFeaturesGenerator	The quantification features generator provides various quantification features.
QuantificationFilter	This class indicates whether identification features or ratios are valid according to the user settings.
RatioEstimator	This class estimates ratios at the peptide and protein level.