Uses of Class
eu.isas.reporter.quantificationdetails.PsmQuantificationDetails

Packages that use PsmQuantificationDetails

Package	Description
eu.isas.reporter	Main package.
eu.isas.reporter.calculation	Package containing classes used for the calculation.

Uses of PsmQuantificationDetails in eu.isas.reporter

Methods in eu.isas.reporter that return PsmQuantificationDetails

Modifier and Type	Method	Description
static PsmQuantificationDetails	Reporter.estimatePSMQuantificationDetails(com.compomics.util.experiment.identification.Identification identification, com.compomics.util.experiment.mass_spectrometry.SpectrumProvider spectrumProvider, QuantificationFeaturesGenerator quantificationFeaturesGenerator, ReporterIonSelectionSettings reporterIonSelectionSettings, RatioEstimationSettings ratioEstimationSettings, com.compomics.util.experiment.quantification.reporterion.ReporterIonQuantification reporterIonQuantification, Long matchKey)	Returns the quantification details of a PSM.

Uses of PsmQuantificationDetails in eu.isas.reporter.calculation

Methods in eu.isas.reporter.calculation that return PsmQuantificationDetails

Modifier and Type	Method	Description
PsmQuantificationDetails	QuantificationFeaturesCache.getPSMQuantificationDetails(String spectrumFile, String spectrumTitle)	Returns PSM quantification details, null if not in cache.
PsmQuantificationDetails	QuantificationFeaturesGenerator.getPSMQuantificationDetails(com.compomics.util.experiment.mass_spectrometry.SpectrumProvider spectrumProvider, Long matchKey)	Returns the quantification details of a PSM.

Methods in eu.isas.reporter.calculation with parameters of type PsmQuantificationDetails

Modifier and Type	Method	Description
void	QuantificationFeaturesCache.addPSMQuantificationDetails(String spectrumFile, String spectrumTitle, PsmQuantificationDetails matchQuantificationDetails)	Adds PSM quantification details ratio to the cache.