Uses of Class
eu.isas.reporter.quantificationdetails.SpectrumQuantificationDetails

Packages that use SpectrumQuantificationDetails

Package	Description
eu.isas.reporter	Main package.
eu.isas.reporter.calculation	Package containing classes used for the calculation.

Uses of SpectrumQuantificationDetails in eu.isas.reporter

Methods in eu.isas.reporter that return SpectrumQuantificationDetails

Modifier and Type	Method	Description
static SpectrumQuantificationDetails	Reporter.estimateSpectrumQuantificationDetails(com.compomics.util.experiment.identification.Identification identification, com.compomics.util.experiment.mass_spectrometry.SpectrumProvider spectrumProvider, QuantificationFeaturesGenerator quantificationFeaturesGenerator, com.compomics.util.experiment.quantification.reporterion.ReporterIonQuantification reporterIonQuantification, ReporterIonSelectionSettings reporterIonSelectionSettings, com.compomics.util.experiment.identification.matches.SpectrumMatch aSpectrumMatch)	Returns the quantification details of a spectrum.

Uses of SpectrumQuantificationDetails in eu.isas.reporter.calculation

Methods in eu.isas.reporter.calculation that return SpectrumQuantificationDetails

Modifier and Type	Method	Description
SpectrumQuantificationDetails	QuantificationFeaturesCache.getSpectrumQuantificationDetails(String spectrumFile, String spectrumTitle)	Returns spectrum quantification details, null if not in cache.
SpectrumQuantificationDetails	QuantificationFeaturesGenerator.getSpectrumQuantificationDetails(com.compomics.util.experiment.mass_spectrometry.SpectrumProvider spectrumProvider, com.compomics.util.experiment.quantification.reporterion.ReporterIonQuantification reporterIonQuantification, ReporterIonSelectionSettings reporterIonSelectionSettings, com.compomics.util.experiment.identification.matches.SpectrumMatch aSpectrumMatch)	Returns the quantification details of a spectrum.

Methods in eu.isas.reporter.calculation with parameters of type SpectrumQuantificationDetails

Modifier and Type	Method	Description
void	QuantificationFeaturesCache.addSpectrumQuantificationDetails(String spectrumFile, String spectrumTitle, SpectrumQuantificationDetails matchQuantificationDetails)	Adds spectrum quantification details ratio to the cache.