Uses of Package
eu.isas.reporter.settings

Packages that use eu.isas.reporter.settings

Package	Description
eu.isas.reporter	Main package.
eu.isas.reporter.calculation	Package containing classes used for the calculation.
eu.isas.reporter.calculation.normalization	Package containing classes used for the quantification.
eu.isas.reporter.cli	Package containing the CLI classes.
eu.isas.reporter.export.report	Package containing classes used for the generation of reports.
eu.isas.reporter.export.report.sections	Package containing classes used for the generation of export sections.
eu.isas.reporter.gui	Package containing the GUI classes used for the generation of exports.
eu.isas.reporter.gui.settings	Package containing GUI classes used for the edition of settings.
eu.isas.reporter.gui.settings.display	Package containing GUI classes used for the edition of the display settings.
eu.isas.reporter.gui.settings.quantification	Package containing GUI classes used for the edition of the quantification settings.
eu.isas.reporter.io	Package containing classes used for saving and opening projects.
eu.isas.reporter.preferences	Package containing the different preferences.
eu.isas.reporter.settings	Package containing the different settings.

Classes in eu.isas.reporter.settings used by eu.isas.reporter

Class	Description
RatioEstimationSettings	Settings for the estimation of a peptide or protein ratio.
ReporterIonSelectionSettings	Preferences for the reporter ions selection in spectra.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.calculation

Class	Description
RatioEstimationSettings	Settings for the estimation of a peptide or protein ratio.
ReporterIonSelectionSettings	Preferences for the reporter ions selection in spectra.
ReporterSettings	This class contains the reporter settings for this project.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.calculation.normalization

Class	Description
NormalizationSettings	Settings used for the normalization.
RatioEstimationSettings	Settings for the estimation of a peptide or protein ratio.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.cli

Class	Description
ReporterIonsLocationType	Enum of the possible spectrum reporter ions locations.
ReporterSettings	This class contains the reporter settings for this project.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.export.report

Class	Description
ReporterSettings	This class contains the reporter settings for this project.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.export.report.sections

Class	Description
ReporterSettings	This class contains the reporter settings for this project.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.gui

Class	Description
ReporterSettings	This class contains the reporter settings for this project.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.gui.settings

Class	Description
ReporterSettings	This class contains the reporter settings for this project.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.gui.settings.display

Class	Description
ClusteringSettings	Settings for the clustering.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.gui.settings.quantification

Class	Description
NormalizationSettings	Settings used for the normalization.
RatioEstimationSettings	Settings for the estimation of a peptide or protein ratio.
ReporterIonSelectionSettings	Preferences for the reporter ions selection in spectra.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.io

Class	Description
ClusteringSettings	Settings for the clustering.
ReporterSettings	This class contains the reporter settings for this project.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.preferences

Class	Description
ClusteringSettings	Settings for the clustering.

Classes in eu.isas.reporter.settings used by eu.isas.reporter.settings

Class	Description
NormalizationSettings	Settings used for the normalization.
RatioEstimationSettings	Settings for the estimation of a peptide or protein ratio.
ReporterIonSelectionSettings	Preferences for the reporter ions selection in spectra.
ReporterIonsLocationType	Enum of the possible spectrum reporter ions locations.
ReporterPreferences	This class contains the quantification options set by the user.
ReporterSettings	This class contains the reporter settings for this project.