4.0.0 com.compomics utilities jar 5.1.16 computational omics utilities https://github.com/compomics/compomics-utilities Open source java library for computational proteomics compomics-utilities-log4j.log 5000KB [%d{dd-MMM-yyyy HH:mm:ss} - %p] "%m" (%C:%L)%n DEBUG UTF-8 UTF-8 The Apache Software License, Version 2.0 https://www.apache.org/licenses/LICENSE-2.0 Lennart Martens lennart lennart.martens AT UGent.be Ghent University and FWO Vlaanderen UML Model Design Java Developer Documentation Harald Barsnes harald harald.barsnes AT uib.no University of Bergen Java Developer Marc Vaudel marc marc.vaudel AT uib.no University of Bergen Java Developer Kenny Helsens kenny kenny.helsens AT UGent.be University of Ghent Java Developer Kenneth Verheggen kenneth kenneth.verheggen AT UGent.be University of Ghent Java Developer Niklaas Colaert kenny niklaas.colaert AT UGent.be University of Ghent Java Developer Dominik Kopczynski dominik dominik.kopczynski AT isas.de Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. Java Developer Carlos Horro carlos carlos.horro AT uib.no University of Bergen Java Developer Dafni Skiadopoulou dafni Dafni Skiadopoulou AT uib.no University of Bergen Java Developer src/main/resources true compomics-utilities.properties src/main/resources false compomics-utilities.properties org.apache.maven.wagon wagon-ssh 1.0-beta-2 maven-compiler-plugin 2.5 1.8 1.8 true true org.apache.maven.plugins maven-jar-plugin 2.4 com.compomics.util.examples.UtilitiesDemo true lib ${project.build.directory}/${project.artifactId}-${project.version} org.apache.maven.plugins maven-dependency-plugin copy-dependencies package copy-dependencies ${project.build.directory}/${project.artifactId}-${project.version}/lib true true false maven-resources-plugin 2.3 copy-resources2 compile copy-resources true target/classes src/main/resources true copy-test-resources generate-test-resources copy-resources true src/test/resources src/main/resources/ copy-resources package copy-resources ${project.build.directory}/${project.artifactId}-${project.version} ./ resources/ exampleFiles/ compomics-utilities.ico LICENSE-2.0.txt README.txt org.apache.maven.plugins maven-javadoc-plugin 2.9.1 1.8 docs/javadoc true en attach-javadocs jar org.apache.maven.plugins maven-source-plugin 2.1.1 attach-sources verify jar-no-fork org.apache.maven.plugins maven-deploy-plugin 2.7 maven-assembly-plugin 2.4 src/main/assembly/zip.xml false make-assembly package single genesis-maven2-repository Genesis maven2 repository https://genesis.ugent.be/archiva/repository/maven2/ default ebi-repo The EBI internal repository https://www.ebi.ac.uk/~maven/m2repo nexus-ebi-release-repo EBI Nexus Repository https://www.ebi.ac.uk/Tools/maven/repos/content/groups/ebi-repo/ nexus-ebi-snapshot-repo EBI Nexus Snapshots Repository https://www.ebi.ac.uk/Tools/maven/repos/content/groups/ebi-snapshots/ junit junit 4.13.2 test jar javax.servlet servlet-api 2.5 javax.xml.bind jaxb-api 2.3.1 commons-io commons-io 2.16.1 org.xerial sqlite-jdbc 3.45.2.0 org.apache.logging.log4j log4j-api 2.23.1 org.apache.logging.log4j log4j-core 2.23.1 org.ogce xpp3 1.1.6 jar com.jgoodies looks 2.2.2 org.swinglabs swing-layout 1.0.3 compile com.carrotsearch jsuffixarrays 0.1.0 org.swinglabs swingx 0.9.1 swing-worker org.swinglabs multiplegradientpaint org.swinglabs filters com.jhlabs batik batik-all 1.6 jar batik pdf-transcoder 1.0 jar xerces xercesImpl 2.12.2 jakarta.xml.bind jakarta.xml.bind-api 4.0.2 psidev.psi.tools xxindex 0.23 jfree jfreechart 1.0.13 no.uib jsparklines 1.0.12 no.uib ols-dialog 3.4.0 commons-cli commons-cli 1.6.0 commons-net commons-net 3.10.0 commons-httpclient commons-httpclient 3.1 jar org.apache.commons commons-compress 1.26.1 org.apache.commons commons-text 1.11.0 org.apache.commons commons-math 2.2 jar uk.ac.ebi.pride.tools braf 1.0.1 uk.ac.ebi.pride.archive web-service-model 0.2.12 umontreal.iro.lecuyer.gof ssj 2.5.0 jar msv msv 20050913 msv isorelax 20050913 msv relaxngDatatype 20050913 msv xsdlib 20050913 net.jimmc jshortcut 0.4-oberzalek jar org.apache.poi poi 5.2.5 com.google.code.gson gson 2.10.1 jar io.airlift aircompressor 0.27 jar org.jgrapht jgrapht-core 1.5.2 archiva.compomics_maven_2 Internal Release Repository https://genesis.ugent.be/archiva/repository/maven2/ archiva.snapshots Internal Snapshot Repository http://genesis.ugent.be/archiva/repository/snapshots