Uses of Package
com.compomics.util.experiment.identification.identification_parameters.tool_specific

Packages that use com.compomics.util.experiment.identification.identification_parameters.tool_specific

Package	Description
com.compomics.util.experiment.identification.identification_parameters.tool_specific	Parameters settings for the search algorithms.
com.compomics.util.experiment.io.identifications.idfilereaders	Experiment classes related to reading search engine files.
com.compomics.util.gui.parameters.identification_parameters.algorithm_settings	Search algorithm settings dialogs.

Classes in com.compomics.util.experiment.identification.identification_parameters.tool_specific used by com.compomics.util.experiment.identification.identification_parameters.tool_specific

Class and Description
CometParameters.CometOutputFormat The available output formats.

Classes in com.compomics.util.experiment.identification.identification_parameters.tool_specific used by com.compomics.util.experiment.io.identifications.idfilereaders

Class and Description
PepnovoParameters PepNovo specific parameters.

Classes in com.compomics.util.experiment.identification.identification_parameters.tool_specific used by com.compomics.util.gui.parameters.identification_parameters.algorithm_settings

Class and Description
AndromedaParameters The Andromeda specific parameters.
CometParameters The Comet specific parameters.
DirecTagParameters The DirecTag specific parameters.
MsAmandaParameters The MS Amanda specific parameters.
MsgfParameters The MS-GF+ specific parameters.
MyriMatchParameters The MyriMatch specific parameters.
NovorParameters Novor specific parameters.
OmssaParameters The OMSSA specific parameters.
PNovoParameters pNovo specific parameters.
TideParameters The Tide specific parameters.
XtandemParameters The X!Tandem specific parameters.