Uses of Package
com.compomics.util.experiment.identification.protein_sequences

Packages that use com.compomics.util.experiment.identification.protein_sequences

Package	Description
com.compomics.util.experiment.identification.protein_sequences	Protein sequence handling related classes.
com.compomics.util.protein_sequences_manager	Classes used for the management of FASTA files.

Classes in com.compomics.util.experiment.identification.protein_sequences used by com.compomics.util.experiment.identification.protein_sequences

Class and Description
FastaIndex This class contains the index of a FASTA file.
SequenceFactory Factory retrieving the information of the loaded FASTA file.
SequenceFactory.HeaderIterator Convenience iterator iterating the headers of a FASTA file without using the cache.
SequenceFactory.ProteinIterator Convenience iterator iterating all proteins in a FASTA file without using index or cache.

Classes in com.compomics.util.experiment.identification.protein_sequences used by com.compomics.util.protein_sequences_manager

Class and Description
FastaIndex This class contains the index of a FASTA file.