Package eu.isas.peptideshaker.export.exportfeatures

Enum PsSearchFeature

java.lang.Object

java.lang.Enum<PsSearchFeature>

eu.isas.peptideshaker.export.exportfeatures.PsSearchFeature

All Implemented Interfaces:

com.compomics.util.io.export.ExportFeature, Serializable, Comparable<PsSearchFeature>, java.lang.constant.Constable

public enum PsSearchFeature
extends Enum<PsSearchFeature>
implements com.compomics.util.io.export.ExportFeature

This class lists the export features linked to the spectrum identification.

Author:

Marc Vaudel

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
cleavage
database
enzyme
fixed_modifications
forward_ion
fragment_tolerance
fragment_tolerance_unit
mc
precursor_tolerance
precursor_tolerance_unit
refinement_fixed_modifications
refinement_variable_modifications
rewind_ion
specificity
variable_modifications

Field Summary

Fields

Modifier and Type	Field	Description
String	description	The description of the feature.
String	title	The title of the feature which will be used for column heading.
static String	type	The type of export feature.

Fields inherited from interface com.compomics.util.io.export.ExportFeature

serialVersionUID

Method Summary

Modifier and Type	Method	Description
String	getDescription()
ArrayList<com.compomics.util.io.export.ExportFeature>	getExportFeatures(boolean includeSubFeatures)
String	getFeatureFamily()
String	getTitle()
boolean	isAdvanced()
static PsSearchFeature	valueOf(String name)	Returns the enum constant of this type with the specified name.
static PsSearchFeature[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

precursor_tolerance_unit

public static final PsSearchFeature precursor_tolerance_unit

precursor_tolerance

public static final PsSearchFeature precursor_tolerance

fragment_tolerance_unit

public static final PsSearchFeature fragment_tolerance_unit

fragment_tolerance

public static final PsSearchFeature fragment_tolerance

cleavage

public static final PsSearchFeature cleavage

enzyme

public static final PsSearchFeature enzyme

mc

public static final PsSearchFeature mc

specificity

public static final PsSearchFeature specificity

database

public static final PsSearchFeature database

forward_ion

public static final PsSearchFeature forward_ion

rewind_ion

public static final PsSearchFeature rewind_ion

fixed_modifications

public static final PsSearchFeature fixed_modifications

variable_modifications

public static final PsSearchFeature variable_modifications

refinement_variable_modifications

public static final PsSearchFeature refinement_variable_modifications

refinement_fixed_modifications

public static final PsSearchFeature refinement_fixed_modifications

Field Details

title

public String title

The title of the feature which will be used for column heading.

description

public String description

The description of the feature.

type

public static final String type

The type of export feature.

See Also:

Constant Field Values

Method Details

values

public static PsSearchFeature[] values()

Returns an array containing the constants of this enum type, in the order they are declared.

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static PsSearchFeature valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

getExportFeatures

public ArrayList<com.compomics.util.io.export.ExportFeature> getExportFeatures(boolean includeSubFeatures)

Specified by:

getExportFeatures in interface com.compomics.util.io.export.ExportFeature

getTitle

public String getTitle()

Specified by:

getTitle in interface com.compomics.util.io.export.ExportFeature

getDescription

public String getDescription()

Specified by:

getDescription in interface com.compomics.util.io.export.ExportFeature

getFeatureFamily

public String getFeatureFamily()

Specified by:

getFeatureFamily in interface com.compomics.util.io.export.ExportFeature

isAdvanced

public boolean isAdvanced()

Specified by:

isAdvanced in interface com.compomics.util.io.export.ExportFeature