Uses of Class
eu.isas.peptideshaker.export.exportfeatures.PsProteinFeature

Packages that use PsProteinFeature 
Package Description
eu.isas.peptideshaker.export.exportfeatures
Export features.
eu.isas.peptideshaker.export.sections
Export sections.

  • Uses of PsProteinFeature in eu.isas.peptideshaker.export.exportfeatures

    Methods in eu.isas.peptideshaker.export.exportfeatures that return PsProteinFeature 
    Modifier and Type Method Description
    static PsProteinFeature PsProteinFeature.valueOf​(String name)
    Returns the enum constant of this type with the specified name.
    static PsProteinFeature[] PsProteinFeature.values()
    Returns an array containing the constants of this enum type, in the order they are declared.

  • Uses of PsProteinFeature in eu.isas.peptideshaker.export.sections

    Methods in eu.isas.peptideshaker.export.sections with parameters of type PsProteinFeature 
    Modifier and Type Method Description
    static String PsProteinSection.getFeature​(com.compomics.util.experiment.identification.features.IdentificationFeaturesGenerator identificationFeaturesGenerator, com.compomics.util.experiment.io.biology.protein.SequenceProvider sequenceProvider, com.compomics.util.experiment.io.biology.protein.ProteinDetailsProvider proteinDetailsProvider, com.compomics.util.experiment.biology.genes.GeneMaps geneMaps, com.compomics.util.parameters.identification.IdentificationParameters identificationParameters, int nSurroundingAas, long proteinKey, com.compomics.util.experiment.identification.matches.ProteinMatch proteinMatch, com.compomics.util.experiment.identification.peptide_shaker.PSParameter psParameter, PsProteinFeature tempProteinFeatures, com.compomics.util.waiting.WaitingHandler waitingHandler)
    Returns the part of the desired section.
    static String PsProteinSection.getFeature​(com.compomics.util.experiment.identification.features.IdentificationFeaturesGenerator identificationFeaturesGenerator, com.compomics.util.experiment.io.biology.protein.SequenceProvider sequenceProvider, com.compomics.util.experiment.io.biology.protein.ProteinDetailsProvider proteinDetailsProvider, com.compomics.util.experiment.biology.genes.GeneMaps geneMaps, com.compomics.util.parameters.identification.IdentificationParameters identificationParameters, int nSurroundingAas, long proteinKey, com.compomics.util.experiment.identification.matches.ProteinMatch proteinMatch, String fractionName, com.compomics.util.experiment.identification.peptide_shaker.PSParameter psParameter, PsProteinFeature tempProteinFeatures, com.compomics.util.waiting.WaitingHandler waitingHandler)
    Returns the part of the desired section.