Package eu.isas.peptideshaker.followup

Class ProteoformExport

java.lang.Object
eu.isas.peptideshaker.followup.ProteoformExport
public class ProteoformExport
extends Object
Export for PathwayMatcher.
Author:
Marc Vaudel, Harald Barsnes

  • Constructor Summary

    Constructors 
    Constructor Description
    ProteoformExport()  

  • Method Summary

    Modifier and Type Method Description
    static void writeProteoforms​(File destinationFile, com.compomics.util.experiment.identification.Identification identification, com.compomics.util.waiting.WaitingHandler waitingHandler)
    Writes an export with all the possible proteoforms of the validated proteins.

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Constructor Details

  • Method Details

    • writeProteoforms

      public static void writeProteoforms​(File destinationFile, com.compomics.util.experiment.identification.Identification identification, com.compomics.util.waiting.WaitingHandler waitingHandler)
      Writes an export with all the possible proteoforms of the validated proteins.
      Parameters:
      destinationFile - the destination file
      identification - the identification
      waitingHandler - the waiting handler