Package eu.isas.peptideshaker.followup
Enum SpectrumExporter.ExportType
java.lang.Object
java.lang.Enum<SpectrumExporter.ExportType>
eu.isas.peptideshaker.followup.SpectrumExporter.ExportType
- All Implemented Interfaces:
Serializable,Comparable<SpectrumExporter.ExportType>,java.lang.constant.Constable
- Enclosing class:
- SpectrumExporter
public static enum SpectrumExporter.ExportType extends Enum<SpectrumExporter.ExportType>
Enum of the different types of export implemented.
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Nested Class Summary
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Enum Constant Summary
Enum Constants Enum Constant Description non_validated_peptidesExports the spectra of PSMs of non-validated peptides.non_validated_proteinsExports the spectra of PSMs of non-validated proteins.non_validated_psmsExports the spectra of non-validated PSMs.validated_psmsExports the spectra of validated PSMs.validated_psms_peptidesExports the spectra of validated PSMs of validated peptides.validated_psms_peptides_proteinsExports the spectra of validated PSMs of validated peptides of validated proteins. -
Field Summary
Fields Modifier and Type Field Description StringdescriptionDescription of the export.intindexIndex for the export type. -
Method Summary
Modifier and Type Method Description static StringgetCommandLineOptions()Returns a description of the command line arguments.static String[]getPossibilities()Returns all possibilities descriptions in an array of string.static SpectrumExporter.ExportTypegetTypeFromIndex(int index)Returns the export type corresponding to a given index.static SpectrumExporter.ExportTypevalueOf(String name)Returns the enum constant of this type with the specified name.static SpectrumExporter.ExportType[]values()Returns an array containing the constants of this enum type, in the order they are declared.
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Enum Constant Details
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non_validated_psms
Exports the spectra of non-validated PSMs. -
non_validated_peptides
Exports the spectra of PSMs of non-validated peptides. -
non_validated_proteins
Exports the spectra of PSMs of non-validated proteins. -
validated_psms
Exports the spectra of validated PSMs. -
validated_psms_peptides
Exports the spectra of validated PSMs of validated peptides. -
validated_psms_peptides_proteins
Exports the spectra of validated PSMs of validated peptides of validated proteins.
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Field Details
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index
public int indexIndex for the export type. -
description
Description of the export.
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Method Details
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values
Returns an array containing the constants of this enum type, in the order they are declared.- Returns:
- an array containing the constants of this enum type, in the order they are declared
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valueOf
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException- if this enum type has no constant with the specified nameNullPointerException- if the argument is null
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getTypeFromIndex
Returns the export type corresponding to a given index.- Parameters:
index- the index of interest- Returns:
- the export type corresponding to a given index
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getPossibilities
Returns all possibilities descriptions in an array of string. Tip: the position in the array corresponds to the type index.- Returns:
- all possibilities descriptions in an array of string
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getCommandLineOptions
Returns a description of the command line arguments.- Returns:
- a description of the command line arguments
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