Uses of Class
eu.isas.peptideshaker.followup.InclusionListExport.ExportFormat
| Package | Description |
|---|---|
| eu.isas.peptideshaker.followup |
Export for follow-up analysis.
|
| eu.isas.peptideshaker.gui.export |
GUI export dialogs.
|
-
Uses of InclusionListExport.ExportFormat in eu.isas.peptideshaker.followup
Methods in eu.isas.peptideshaker.followup that return InclusionListExport.ExportFormat Modifier and Type Method Description static InclusionListExport.ExportFormatInclusionListExport.ExportFormat. getTypeFromIndex(int index)Returns the export type corresponding to a given index.static InclusionListExport.ExportFormatInclusionListExport.ExportFormat. valueOf(String name)Returns the enum constant of this type with the specified name.static InclusionListExport.ExportFormat[]InclusionListExport.ExportFormat. values()Returns an array containing the constants of this enum type, in the order they are declared.Methods in eu.isas.peptideshaker.followup with parameters of type InclusionListExport.ExportFormat Modifier and Type Method Description static voidInclusionListExport. exportInclusionList(File destinationFile, com.compomics.util.experiment.identification.Identification identification, com.compomics.util.experiment.identification.features.IdentificationFeaturesGenerator identificationFeaturesGenerator, com.compomics.util.experiment.mass_spectrometry.SpectrumProvider spectrumProvider, ArrayList<Integer> proteinFilters, ArrayList<InclusionListExport.PeptideFilterType> peptideFilters, InclusionListExport.ExportFormat exportFormat, com.compomics.util.parameters.identification.search.SearchParameters searchParameters, double rtWindow, com.compomics.util.waiting.WaitingHandler waitingHandler, com.compomics.util.gui.filtering.FilterParameters filterPreferences)Writes an inclusion list based on the validated PSMs of the validated peptides of the validated proteins.static FileInclusionListExport.ExportFormat. verifyFileExtension(File destinationFile, InclusionListExport.ExportFormat exportFormat)Verifies that the file extension is chosen according to the manufacturers specification and adds the extension if missing. -
Uses of InclusionListExport.ExportFormat in eu.isas.peptideshaker.gui.export
Constructors in eu.isas.peptideshaker.gui.export with parameters of type InclusionListExport.ExportFormat Constructor Description InclusionListExportDialog(FollowUpExportDialog followupPreferencesDialog, InclusionListExport.ExportFormat exportFormat, boolean modal)Creates a new InclusionListExportDialog.