Uses of Class
eu.isas.peptideshaker.followup.ProgenesisExport.ExportType
| Package | Description |
|---|---|
| eu.isas.peptideshaker.followup |
Export for follow-up analysis.
|
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Uses of ProgenesisExport.ExportType in eu.isas.peptideshaker.followup
Methods in eu.isas.peptideshaker.followup that return ProgenesisExport.ExportType Modifier and Type Method Description static ProgenesisExport.ExportTypeProgenesisExport.ExportType. getTypeFromIndex(int index)Returns the export type corresponding to a given index.static ProgenesisExport.ExportTypeProgenesisExport.ExportType. valueOf(String name)Returns the enum constant of this type with the specified name.static ProgenesisExport.ExportType[]ProgenesisExport.ExportType. values()Returns an array containing the constants of this enum type, in the order they are declared.Methods in eu.isas.peptideshaker.followup with parameters of type ProgenesisExport.ExportType Modifier and Type Method Description static voidProgenesisExport. writeProgenesisExport(File destinationFile, com.compomics.util.experiment.io.biology.protein.SequenceProvider sequenceProvider, com.compomics.util.experiment.io.biology.protein.ProteinDetailsProvider proteinDetailsProvider, com.compomics.util.experiment.identification.Identification identification, ProgenesisExport.ExportType exportType, com.compomics.util.waiting.WaitingHandler waitingHandler, HashSet<String> targetedModifications, com.compomics.util.parameters.identification.advanced.SequenceMatchingParameters sequenceMatchingPreferences)Writes a file containing the PSMs in a Progenesis compatible format.