Uses of Class
eu.isas.peptideshaker.followup.SpectrumExporter.ExportType

Packages that use SpectrumExporter.ExportType

Package	Description
eu.isas.peptideshaker.followup	Export for follow-up analysis.

Uses of SpectrumExporter.ExportType in eu.isas.peptideshaker.followup

Methods in eu.isas.peptideshaker.followup that return SpectrumExporter.ExportType

Modifier and Type	Method	Description
static SpectrumExporter.ExportType	SpectrumExporter.ExportType.getTypeFromIndex(int index)	Returns the export type corresponding to a given index.
static SpectrumExporter.ExportType	SpectrumExporter.ExportType.valueOf(String name)	Returns the enum constant of this type with the specified name.
static SpectrumExporter.ExportType[]	SpectrumExporter.ExportType.values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods in eu.isas.peptideshaker.followup with parameters of type SpectrumExporter.ExportType

Modifier and Type	Method	Description
ArrayList<File>	SpectrumExporter.exportSpectra(File destinationFolder, com.compomics.util.waiting.WaitingHandler waitingHandler, SpectrumExporter.ExportType exportType, com.compomics.util.parameters.identification.advanced.SequenceMatchingParameters sequenceMatchingPreferences)	Exports the spectra from different categories of PSMs according to the export type.
static File	SpectrumExporter.getDestinationFile(File destinationFolder, String originalFileName, SpectrumExporter.ExportType exportType)	Returns the destination file for the given export.
static String	SpectrumExporter.getSuffix(SpectrumExporter.ExportType exportType)	Returns the suffix for a spectrum file name.
static boolean	SpectrumExporter.include(String spectrumFile, String spectrumTitle, com.compomics.util.experiment.identification.Identification identification, com.compomics.util.parameters.identification.advanced.SequenceMatchingParameters sequenceMatchingParameters, SpectrumExporter.ExportType exportType)	Indicates whether a spectrum should be exported.