Uses of Class
eu.isas.peptideshaker.preferences.UserPreferencesParent

Packages that use UserPreferencesParent

Package	Description
eu.isas.peptideshaker.cmd	Command line usage.
eu.isas.peptideshaker.utils	Various utilities classes.

Uses of UserPreferencesParent in eu.isas.peptideshaker.cmd

Subclasses of UserPreferencesParent in eu.isas.peptideshaker.cmd

Modifier and Type	Class	Description
class	FollowUpCLI	Command line interface to run follow-up analysis on psdb files.
class	MzidCLI	Command line interface to export mzid files from psdb files.
class	PeptideShakerCLI	A command line interface to run PeptideShaker.
class	ReportCLI	This class performs the command line export of reports in command line.

Uses of UserPreferencesParent in eu.isas.peptideshaker.utils

Subclasses of UserPreferencesParent in eu.isas.peptideshaker.utils

Modifier and Type	Class	Description
class	PsdbParent	Implementing this abstract class allows interacting with a psdb files.