eu.isas.peptideshaker.export.sections

Class PsProjectSection

java.lang.Object

eu.isas.peptideshaker.export.sections.PsProjectSection

public class PsProjectSection
extends Object

This class outputs the project related export features.

Author:

Marc Vaudel

Constructor Summary

Constructors

Constructor and Description
PsProjectSection(ArrayList<com.compomics.util.io.export.ExportFeature> exportFeatures, boolean indexes, boolean header, com.compomics.util.io.export.ExportWriter writer) Constructor

Method Summary

Modifier and Type	Method and Description
void	writeSection(String experiment, ProjectDetails projectDetails, com.compomics.util.waiting.WaitingHandler waitingHandler) Writes the desired section.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PsProjectSection

public PsProjectSection(ArrayList<com.compomics.util.io.export.ExportFeature> exportFeatures,
                        boolean indexes,
                        boolean header,
                        com.compomics.util.io.export.ExportWriter writer)

Constructor

Parameters:

exportFeatures - the features to export in this section

indexes - indicates whether the line index should be written

header - indicates whether the table header should be written

writer - the writer which will write to the file

Method Detail

writeSection

public void writeSection(String experiment,
                         ProjectDetails projectDetails,
                         com.compomics.util.waiting.WaitingHandler waitingHandler)
                  throws IOException

Writes the desired section.

Parameters:

experiment - the experiment name

projectDetails - the details of this project

waitingHandler - the waiting handler

Throws:

IOException - exception thrown whenever an error occurred while writing the file