eu.isas.peptideshaker.followup

Class ProteoformExport

java.lang.Object

eu.isas.peptideshaker.followup.ProteoformExport

public class ProteoformExport
extends Object

Export for PathwayMatcher.

Author:

Marc Vaudel, Harald Barsnes

Constructor Summary

Constructors

Constructor and Description
ProteoformExport()

Method Summary

Modifier and Type	Method and Description
static void	writeProteoforms(File destinationFile, com.compomics.util.experiment.identification.Identification identification, com.compomics.util.waiting.WaitingHandler waitingHandler) Writes an export with all the possible proteoforms of the validated proteins.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ProteoformExport

public ProteoformExport()

Method Detail

writeProteoforms

public static void writeProteoforms(File destinationFile,
                                    com.compomics.util.experiment.identification.Identification identification,
                                    com.compomics.util.waiting.WaitingHandler waitingHandler)

Writes an export with all the possible proteoforms of the validated proteins.

Parameters:

destinationFile - the destination file

identification - the identification

waitingHandler - the waiting handler