Uses of Package
eu.isas.peptideshaker.scoring.maps

Packages that use eu.isas.peptideshaker.scoring.maps

Package	Description
eu.isas.peptideshaker.fileimport	Import of search results.
eu.isas.peptideshaker.processing	Classes used to create PeptideShaker projects.
eu.isas.peptideshaker.scoring	Identification scoring.
eu.isas.peptideshaker.scoring.maps.specific	Specific target decoy maps.
eu.isas.peptideshaker.scoring.psm_scoring	PSM scoring.
eu.isas.peptideshaker.validation	Matches validation.

Classes in eu.isas.peptideshaker.scoring.maps used by eu.isas.peptideshaker.fileimport

Class and Description
InputMap This class contains basic information about the hits as imported from the various search engine result files.

Classes in eu.isas.peptideshaker.scoring.maps used by eu.isas.peptideshaker.processing

Class and Description
InputMap This class contains basic information about the hits as imported from the various search engine result files.

Classes in eu.isas.peptideshaker.scoring.maps used by eu.isas.peptideshaker.scoring

Class and Description
InputMap This class contains basic information about the hits as imported from the various search engine result files.

Classes in eu.isas.peptideshaker.scoring.maps used by eu.isas.peptideshaker.scoring.maps.specific

Class and Description
SpecificTargetDecoyMap This stores target decoy maps grouped by file and category.

Classes in eu.isas.peptideshaker.scoring.maps used by eu.isas.peptideshaker.scoring.psm_scoring

Class and Description
InputMap This class contains basic information about the hits as imported from the various search engine result files.

Classes in eu.isas.peptideshaker.scoring.maps used by eu.isas.peptideshaker.validation

Class and Description
InputMap This class contains basic information about the hits as imported from the various search engine result files.