Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES

## Uses of Interface
org.ensembl.driver.FeatureAdaptor

Packages that use FeatureAdaptor
org.ensembl.driver | Driver and adaptors for accessing ensembl core databases.
org.ensembl.variation.driver | Driver and adaptors for accessing ensembl variation databases.

Uses of FeatureAdaptor in org.ensembl.driver

Subinterfaces of FeatureAdaptor in org.ensembl.driver
`interface` | `DnaDnaAlignmentAdaptor` Provides access to DnaDnaAlignments in a datasource.
`interface` | `DnaProteinAlignmentAdaptor` Provides access to DnaProteinAlignments in a datasource.
`interface` | `ExonAdaptor` Provides access to Exons in the datasource.
`interface` | `GeneAdaptor` Provides access to genes in the datasource.
`interface` | `LockableGeneAdaptor` When the implementing class overrides store() the intention is that it will succeed only if the gene is locked by the 'current' user and that the lock is released before any other user can modify the gene.
`interface` | `MiscFeatureAdaptor` Adaptor for retrieving MiscFeatures.
`interface` | `OligoFeatureAdaptor` Adaptor for retrieving OligoFeatures from a database.
`interface` | `PredictionExonAdaptor`
`interface` | `PredictionTranscriptAdaptor` Provides access to PredictionTranscripts in the datasource.
`interface` | `QtlFeatureAdaptor` Retrieves QtlFeatures from the database.
`interface` | `RepeatFeatureAdaptor` Provides access to RepeatFeatures in the datasource.
`interface` | `SimpleFeatureAdaptor` Provides access to SimpleFeatures in the datasource.
`interface` | `TranscriptAdaptor` Provides access to Transcripts in the datasource.

Constructors in org.ensembl.driver with parameters of type FeatureAdaptor
`FeatureIterator(FeatureAdaptor adaptor, int featureBufferSize, boolean loadChildren)` Create an iterator over all features in the adaptor.
`FeatureIterator(FeatureAdaptor adaptor, int featureBufferSize, boolean loadChildren, long[] internalIDs)` Create an iterator over features with the specified internalIDs.
`FeatureIterator(FeatureAdaptor adaptor, int chunkSize, boolean loadChildren, Location location, LocationConverter locationConverter)` Create an iterator over features in the adaptor that overlap the specified location.
`LocationFeatureIterator(FeatureAdaptor adaptor, int locationChunkSize, boolean loadChildren, Location location, LocationConverter locationConverter)`

Uses of FeatureAdaptor in org.ensembl.variation.driver

Subinterfaces of FeatureAdaptor in org.ensembl.variation.driver
`interface` | `LDFeatureAdaptor` Provides database access for retrieving LDFeatures as either a simple List or wrapped in an optimised LDFeaturesContainer.
`interface` | `VariationFeatureAdaptor` Adaptor for retrieving VariationFeatures.
`interface` | `VariationGroupFeatureAdaptor` This adaptor provides database connectivity for VariationGroupFeature objects.

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES