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## Uses of Interface
org.ensembl.compara.datamodel.GenomeDB

Packages that use GenomeDB
org.ensembl.compara.datamodel | Data types that are unique to ensembl compara databases such as Homology and GenomicAlign.
org.ensembl.compara.driver | Compara adaptors.

Uses of GenomeDB in org.ensembl.compara.datamodel

Methods in org.ensembl.compara.datamodel that return GenomeDB
`GenomeDB` | `ComparaDataFactory.createGenomeDB()`
`GenomeDB` | `DnaFragment.getGenomeDB()`

Methods in org.ensembl.compara.datamodel with parameters of type GenomeDB
`void` | `DnaFragment.setGenomeDB(GenomeDB genomeDB)`

Uses of GenomeDB in org.ensembl.compara.driver

Methods in org.ensembl.compara.driver that return GenomeDB
`GenomeDB` | `GenomeDBAdaptor.fetch(java.lang.String speciesName, java.lang.String assembly)`
`GenomeDB` | `GenomeDBAdaptor.fetch(long internalId)`
`GenomeDB` | `GenomeDBAdaptor.fetch(java.lang.String speciesName)`

Methods in org.ensembl.compara.driver with parameters of type GenomeDB
`java.util.List` | `GenomicAlignAdaptor.fetch(DnaFragment dnaFragment, GenomeDB targetGenome, int start, int end, java.lang.String methodLinkType)`
`java.util.List` | `MethodLinkSpeciesSetAdaptor.fetch(MethodLink link, GenomeDB[] genomes)`
`java.util.List` | `MethodLinkSpeciesSetAdaptor.fetch(MethodLink link, GenomeDB genome)`
`java.util.List` | `MethodLinkSpeciesSetAdaptor.fetch(GenomeDB genomeDB)`
`java.util.List` | `DnaFragmentAdaptor.fetch(GenomeDB genomeDB, java.lang.String coordSystemName, java.lang.String name)`
`boolean` | `GenomeDBAdaptor.firstArgumentIsKnownConsensusAndSecondIsKnowQuery(GenomeDB consensusDB, GenomeDB queryDB)`
`int` | `GenomeDBAdaptor.store(GenomeDB genomeDB)`

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