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## Uses of Interface
org.ensembl.datamodel.SequenceRegion

Packages that use SequenceRegion
org.ensembl.datamodel | Data types that appear in the core ensembl databases such as Genes, Exons and Karyotypes and various support classes such as Location.
org.ensembl.driver | Driver and adaptors for accessing ensembl core databases.

Uses of SequenceRegion in org.ensembl.datamodel

Methods in org.ensembl.datamodel that return SequenceRegion
`SequenceRegion` | `Location.getSequenceRegion()`

Methods in org.ensembl.datamodel with parameters of type SequenceRegion
`void` | `Location.setSequenceRegion(SequenceRegion sequenceRegion)`

Constructors in org.ensembl.datamodel with parameters of type SequenceRegion
`Location(CoordinateSystem cs, SequenceRegion seqRegion)`

Uses of SequenceRegion in org.ensembl.driver

Methods in org.ensembl.driver that return SequenceRegion
`SequenceRegion` | `SequenceRegionAdaptor.fetch(long internalID)` Fetch a SequenceRegion by its internalID.
`SequenceRegion` | `SequenceRegionAdaptor.fetch(java.lang.String name, CoordinateSystem cs)` Fetch a SequenceRegion by name and co-ordinate system.
`SequenceRegion` | `SequenceRegionAdaptor.fetch(Location loc)` Fetch a SequenceRegion corresponding to a Location.
`SequenceRegion[]` | `SequenceRegionAdaptor.fetchAllByCoordinateSystem(CoordinateSystem cs)` Fetch all the sequence regions for a particular co-ordinate system.
`SequenceRegion[]` | `SequenceRegionAdaptor.fetchAllByAttributeCode(java.lang.String code)` Get all the sequence regions that have an attribute with a particular code set, irrespective of what the value of the attribute is.
`SequenceRegion[]` | `SequenceRegionAdaptor.fetchAllByAttributeValue(java.lang.String code, java.lang.String value)` Fetch all the sequence regions that have an attribute set to a certain value.

Methods in org.ensembl.driver with parameters of type SequenceRegion
`Location` | `AssemblyExceptionAdaptor.rereference(Location loc, SequenceRegion targetSeqRegion)` Refereferences the source locations.
`void` | `SequenceRegionAdaptor.fetchComplete(SequenceRegion seqRegion)` Sets the attributes on the seqRegion.
`Location` | `LocationConverter.rereference(Location loc, SequenceRegion seqRegion)` References locations into the same sequence region specified by target location.

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