Package | Description |
---|---|
com.compomics.util.db |
Database related classes.
|
com.compomics.util.experiment.identification |
Experiment classes related to identifications.
|
com.compomics.util.experiment.identification.protein_inference.proteintree |
Protein sequence database indexing classes.
|
Modifier and Type | Method and Description |
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void |
ObjectsCache.addDb(ObjectsDB objectsDB)
Adds a database in the list of the databases handled by the cache.
|
Modifier and Type | Method and Description |
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ObjectsDB |
IdentificationDB.getObjectsDB()
Returns the database used to store matches.
|
Modifier and Type | Method and Description |
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static String |
ProteinTreeComponentsFactory.getFastaFilePath(ObjectsDB objectsDB)
Returns the FASTA file path.
|
static String |
ProteinTreeComponentsFactory.getVersion(ObjectsDB objectsDB)
Returns the version.
|
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