com.compomics.util.experiment.biology.aminoacids

Class Alanine

java.lang.Object

com.compomics.util.experiment.biology.AminoAcid

com.compomics.util.experiment.biology.aminoacids.Alanine

All Implemented Interfaces:

Serializable

public class Alanine
extends AminoAcid

Alanine.

Author:

Marc Vaudel

See Also:

Serialized Form

Field Summary

Fields inherited from class com.compomics.util.experiment.biology.AminoAcid

A, aminoAcidCombinations, aminoAcidStrings, averageMass, B, C, D, E, F, G, H, I, J, K, L, M, monoisotopicAtomChain, monoisotopicMass, N, name, O, P, Q, R, S, singleLetterCode, standardGeneticCode, subAminoAcidsWithCombination, subAminoAcidsWithoutCombination, T, threeLetterCode, U, V, W, X, Y, Z

Constructor Summary

Constructors

Constructor and Description
Alanine() Constructor.

Method Summary

Modifier and Type	Method and Description
boolean	iscombination() Indicates whether the amino acid object refers to a combination of amino acids like B, J, Z or X.

Methods inherited from class com.compomics.util.experiment.biology.AminoAcid

equals, getAminoAcid, getAminoAcid, getAminoAcidFromGeneticCode, getAminoAcids, getAminoAcidsList, getCombinations, getMatchingAminoAcid, getMatchingSequence, getMonoisotopicAtomChain, getMonoisotopicMass, getSingleLetterCodeAsChar, getStandardGeneticCode, getStandardGeneticCodeForCombination, getSubAminoAcids, getSubAminoAcids, getUniqueAminoAcids

Methods inherited from class java.lang.Object

clone, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Alanine

public Alanine()

Constructor.

Method Detail

iscombination

public boolean iscombination()

Description copied from class: AminoAcid

Indicates whether the amino acid object refers to a combination of amino acids like B, J, Z or X.

Specified by:

iscombination in class AminoAcid

Returns:

an boolean indicating whether the amino acid object refers to a combination of amino acids like B, J, Z or X