Uses of Class
com.compomics.util.experiment.identification.matches_iterators.PsmIterator

Packages that use PsmIterator

Package	Description
com.compomics.util.experiment.identification	Experiment classes related to identifications.

Uses of PsmIterator in com.compomics.util.experiment.identification

Methods in com.compomics.util.experiment.identification that return PsmIterator

Modifier and Type	Method and Description
PsmIterator	Identification.getPsmIterator(ArrayList<String> spectrumKeys, ArrayList<UrParameter> psmParameters, boolean loadAssumptions, WaitingHandler waitingHandler) Returns a PSM iterator.
PsmIterator	Identification.getPsmIterator(ArrayList<String> spectrumKeys, boolean loadAssumptions, WaitingHandler waitingHandler) Returns a PSM iterator.
PsmIterator	Identification.getPsmIterator(boolean loadAssumptions, ArrayList<UrParameter> psmParameters, WaitingHandler waitingHandler) Returns a PSM iterator iterating all PSMs in a file.
PsmIterator	Identification.getPsmIterator(String spectrumFile, ArrayList<String> spectrumKeys, ArrayList<UrParameter> psmParameters, boolean loadAssumptions, WaitingHandler waitingHandler) Returns a PSM iterator.
PsmIterator	Identification.getPsmIterator(String spectrumFile, ArrayList<UrParameter> psmParameters, boolean loadAssumptions, WaitingHandler waitingHandler) Returns a PSM iterator iterating all PSMs in a file.
PsmIterator	Identification.getPsmIterator(String spectrumFile, boolean loadAssumptions, WaitingHandler waitingHandler) Returns a PSM iterator iterating all PSMs in a file.