com.compomics.util.experiment.quantification.reporterion

Class ReporterMethodFactory

java.lang.Object

com.compomics.util.experiment.personalization.ExperimentObject

com.compomics.util.experiment.quantification.reporterion.ReporterMethodFactory

All Implemented Interfaces:

Serializable, Cloneable

public class ReporterMethodFactory
extends ExperimentObject

This factory imports reporter methods details from an XMl file.

Author:

Marc Vaudel, Harald Barsnes

See Also:

Serialized Form

Method Summary

Modifier and Type	Method and Description
static ReporterMethodFactory	getInstance() Constructor for the factory.
HashMap<String,ReporterMethod>	getMethods() Returns the methods implemented in the factory.
ArrayList<String>	getMethodsNames() Returns the name of the methods present in the factory.
String[]	getMethodsNamesAsArray() Returns the methods names as array.
ReporterMethod	getReporterMethod(String methodName) Returns the reporter methods corresponding to the given name.
void	importMethods(File aFile) Imports the methods from an XML file.
void	saveFile(File aFile) Save to file.

Methods inherited from class com.compomics.util.experiment.personalization.ExperimentObject

addUrParam, getParameterKey, getUrParam

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

getInstance

public static ReporterMethodFactory getInstance()

Constructor for the factory.

Returns:

the reporter method factory

getMethods

public HashMap<String,ReporterMethod> getMethods()

Returns the methods implemented in the factory.

Returns:

the methods implemented in the factory

getMethodsNames

public ArrayList<String> getMethodsNames()

Returns the name of the methods present in the factory.

Returns:

the name of the methods present in the factory

getMethodsNamesAsArray

public String[] getMethodsNamesAsArray()

Returns the methods names as array.

Returns:

the methods names

getReporterMethod

public ReporterMethod getReporterMethod(String methodName)

Returns the reporter methods corresponding to the given name.

Parameters:

methodName - the name of the method

Returns:

the reporter methods

saveFile

public void saveFile(File aFile)
              throws IOException

Save to file.

Parameters:

aFile - the file to save to

Throws:

IOException - thrown whenever a problem occurred while writing the file

importMethods

public void importMethods(File aFile)
                   throws IOException,
                          org.xmlpull.v1.XmlPullParserException

Imports the methods from an XML file.

Parameters:

aFile - the XML file

Throws:

IOException - exception thrown whenever an error occurred while reading the file

org.xmlpull.v1.XmlPullParserException - exception thrown whenever an error occurred while parsing the XML file