com.compomics.util.experiment.refinementparameters

Class PepnovoAssumptionDetails

java.lang.Object

com.compomics.util.experiment.refinementparameters.PepnovoAssumptionDetails

All Implemented Interfaces:

UrParameter, Serializable

public class PepnovoAssumptionDetails
extends Object
implements UrParameter

This class contains pepnovo assumption details which are not contained in the tag assumption class which will be saved as additional parameter.

Author:

Marc Vaudel

See Also:

Serialized Form

Field Summary

Fields inherited from interface com.compomics.util.experiment.personalization.UrParameter

serialVersionUID

Constructor Summary

Constructors

Constructor and Description
PepnovoAssumptionDetails() Constructor.

Method Summary

Modifier and Type	Method and Description
String	getFamilyName() This method returns the family name of the parameter.
int	getIndex() This method returns the index of the parameter.
double	getMH() Returns the PepNovo mH.
double	getRankScore() Returns the PepNovo rank score.
void	setMH(double mH) Sets the PepNovo provided mH.
void	setRankScore(double rankScore) Sets the PepNovo rank score.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PepnovoAssumptionDetails

public PepnovoAssumptionDetails()

Constructor.

Method Detail

getRankScore

public double getRankScore()

Returns the PepNovo rank score.

Returns:

the PepNovo rank score

setRankScore

public void setRankScore(double rankScore)

Sets the PepNovo rank score.

Parameters:

rankScore - the PepNovo rank score

getMH

public double getMH()

Returns the PepNovo mH.

Returns:

the PepNovo mH

setMH

public void setMH(double mH)

Sets the PepNovo provided mH.

Parameters:

mH - the PepNovo mH

getFamilyName

public String getFamilyName()

Description copied from interface: UrParameter

This method returns the family name of the parameter. Shall not contain '|'.

Specified by:

getFamilyName in interface UrParameter

Returns:

family name

getIndex

public int getIndex()

Description copied from interface: UrParameter

This method returns the index of the parameter. Shall not contain '|'.

Specified by:

getIndex in interface UrParameter

Returns:

the index of the parameter