com.compomics.util.preferences

Class ProteinInferencePreferences

java.lang.Object

com.compomics.util.preferences.ProteinInferencePreferences

All Implemented Interfaces:

Serializable

public class ProteinInferencePreferences
extends Object
implements Serializable

Generic class grouping the protein inference preferences.

Author:

Marc Vaudel, Harald Barsnes

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
ProteinInferencePreferences()

Method Summary

Modifier and Type	Method and Description
boolean	equals(ProteinInferencePreferences otherProteinInferencePreferences) Returns true if the objects have identical settings.
File	getProteinSequenceDatabase() Returns the path to the database used.
String	getShortDescription() Returns a short description of the parameters.
void	setProteinSequenceDatabase(File proteinSequenceDatabase) Sets the path to the database used.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ProteinInferencePreferences

public ProteinInferencePreferences()

Method Detail

getProteinSequenceDatabase

public File getProteinSequenceDatabase()

Returns the path to the database used.

Returns:

the path to the database used

setProteinSequenceDatabase

public void setProteinSequenceDatabase(File proteinSequenceDatabase)

Sets the path to the database used.

Parameters:

proteinSequenceDatabase - the path to the database used

getShortDescription

public String getShortDescription()

Returns a short description of the parameters.

Returns:

a short description of the parameters

equals

public boolean equals(ProteinInferencePreferences otherProteinInferencePreferences)

Returns true if the objects have identical settings.

Parameters:

otherProteinInferencePreferences - the ProteinInferencePreferences to compare to

Returns:

true if the objects have identical settings