com.compomics.util.experiment.biology.taxonomy.mappings

Enum EnsemblGenomesSpecies.EnsemblGenomeDivision

java.lang.Object

java.lang.Enum<EnsemblGenomesSpecies.EnsemblGenomeDivision>

com.compomics.util.experiment.biology.taxonomy.mappings.EnsemblGenomesSpecies.EnsemblGenomeDivision

All Implemented Interfaces:

Serializable, Comparable<EnsemblGenomesSpecies.EnsemblGenomeDivision>

Enclosing class:

EnsemblGenomesSpecies

public static enum EnsemblGenomesSpecies.EnsemblGenomeDivision
extends Enum<EnsemblGenomesSpecies.EnsemblGenomeDivision>

Enum of the different Ensembl genome divisions.

Enum Constant Summary

Enum Constants

Enum Constant and Description
bacteria
fungi
metazoa
plants
protists

Field Summary

Fields

Modifier and Type	Field and Description
String	ensemblName The name in the Ensembl mapping file.
String	ensemblType The schema name for XML queries.

Method Summary

Modifier and Type	Method and Description
static EnsemblGenomesSpecies.EnsemblGenomeDivision	getEnsemblGenomeDivisionFromName(String ensemblName) Returns the EnsemblGenomeDivision corresponding to the given Ensembl name.
static EnsemblGenomesSpecies.EnsemblGenomeDivision	valueOf(String name) Returns the enum constant of this type with the specified name.
static EnsemblGenomesSpecies.EnsemblGenomeDivision[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

bacteria

public static final EnsemblGenomesSpecies.EnsemblGenomeDivision bacteria

fungi

public static final EnsemblGenomesSpecies.EnsemblGenomeDivision fungi

metazoa

public static final EnsemblGenomesSpecies.EnsemblGenomeDivision metazoa

plants

public static final EnsemblGenomesSpecies.EnsemblGenomeDivision plants

protists

public static final EnsemblGenomesSpecies.EnsemblGenomeDivision protists

Field Detail

ensemblName

public final String ensemblName

The name in the Ensembl mapping file.

ensemblType

public final String ensemblType

The schema name for XML queries.

Method Detail

values

public static EnsemblGenomesSpecies.EnsemblGenomeDivision[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (EnsemblGenomesSpecies.EnsemblGenomeDivision c : EnsemblGenomesSpecies.EnsemblGenomeDivision.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static EnsemblGenomesSpecies.EnsemblGenomeDivision valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

getEnsemblGenomeDivisionFromName

public static EnsemblGenomesSpecies.EnsemblGenomeDivision getEnsemblGenomeDivisionFromName(String ensemblName)

Returns the EnsemblGenomeDivision corresponding to the given Ensembl name. Null if not found.

Parameters:

ensemblName - the Ensembl name

Returns:

the EnsemblGenomeDivision