Package com.compomics.util.experiment.quantification

Experiment classes related to quantification.

See: Description

Class Summary

Class	Description
Quantification	An abstract quantification class.

Enum Summary

Enum	Description
Quantification.QuantificationMethod	The implemented quantification methods.

Package com.compomics.util.experiment.quantification Description

Experiment classes related to quantification. The quantification methods implemented are: - MS2 reporter ion based quantification (for instance iTRAQ and TMT) - Spectrum counting (emPAI and NSAF, in PeptideShaker) TODO: - MS1 labeling strategies (like SILAC, 18O, ICAT, AQUA, ICPL) - MS1 label free quantification - TIC