public class AlignmentBlock extends Object
Constructor and Description |
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AlignmentBlock(int aPdbStart,
int aPdbEnd,
int aSpStart,
int aSpEnd,
String aPdbAccession,
String aSpAccession)
Constructor.
|
Modifier and Type | Method and Description |
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int |
getDifference()
Returns the difference.
|
String |
getPdbAccession()
Returns the PDB accession.
|
int |
getPdbEnd()
Returns the PDB end.
|
int |
getPdbStart()
Returns the PDB start.
|
String |
getSpAccession()
Returns the SP accession.
|
int |
getSpEnd()
Returns the SP end.
|
int |
getSpStart()
Returns the SP start.
|
public AlignmentBlock(int aPdbStart, int aPdbEnd, int aSpStart, int aSpEnd, String aPdbAccession, String aSpAccession)
aPdbStart
- the PDB start indexaPdbEnd
- the PDB end indexaSpStart
- the UniProt start indexaSpEnd
- the UniProt end indexaPdbAccession
- the PDB accessionaSpAccession
- the UniProt accessionpublic int getPdbStart()
public int getPdbEnd()
public int getSpStart()
public int getSpEnd()
public String getPdbAccession()
public String getSpAccession()
public int getDifference()
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