Uses of Package
com.compomics.util.experiment.identification.amino_acid_tags

Packages that use com.compomics.util.experiment.identification.amino_acid_tags

Package	Description
com.compomics.util.experiment.biology	Experiment classes related to biological entities.
com.compomics.util.experiment.identification.amino_acid_tags	Amino Acid Tag classes.
com.compomics.util.experiment.identification.amino_acid_tags.matchers	Tag matching classes.
com.compomics.util.experiment.identification.protein_inference.proteintree	Protein sequence database indexing classes.
com.compomics.util.experiment.identification.spectrum_annotation.spectrum_annotators	Spectrum annotation.
com.compomics.util.experiment.identification.spectrum_assumptions	Implementations of the SpectrumIdentificationAssumption.
com.compomics.util.gui.spectrum	Spectrum and Chromatogram visualization GUI classes.

Classes in com.compomics.util.experiment.identification.amino_acid_tags used by com.compomics.util.experiment.biology

Class and Description
Tag This class represents a sequence mass tag.
TagComponent Interface for a sequence tag component.

Classes in com.compomics.util.experiment.identification.amino_acid_tags used by com.compomics.util.experiment.identification.amino_acid_tags

Class and Description
SequenceSegment Segment of sequence indexed on a protein sequence.
Tag This class represents a sequence mass tag.
TagComponent Interface for a sequence tag component.

Classes in com.compomics.util.experiment.identification.amino_acid_tags used by com.compomics.util.experiment.identification.amino_acid_tags.matchers

Class and Description
SequenceSegment Segment of sequence indexed on a protein sequence.
Tag This class represents a sequence mass tag.

Classes in com.compomics.util.experiment.identification.amino_acid_tags used by com.compomics.util.experiment.identification.protein_inference.proteintree

Class and Description
Tag This class represents a sequence mass tag.

Classes in com.compomics.util.experiment.identification.amino_acid_tags used by com.compomics.util.experiment.identification.spectrum_annotation.spectrum_annotators

Class and Description
Tag This class represents a sequence mass tag.

Classes in com.compomics.util.experiment.identification.amino_acid_tags used by com.compomics.util.experiment.identification.spectrum_assumptions

Class and Description
Tag This class represents a sequence mass tag.

Classes in com.compomics.util.experiment.identification.amino_acid_tags used by com.compomics.util.gui.spectrum

Class and Description
Tag This class represents a sequence mass tag.