Package | Description |
---|---|
com.compomics.util.general |
General, top-level tasks that are used throughout the other packages in the util section.
|
com.compomics.util.gui |
Basic GUI classes.
|
com.compomics.util.gui.spectrum |
Spectrum and Chromatogram visualization GUI classes.
|
com.compomics.util.gui.utils |
GUI utilities classes.
|
com.compomics.util.io |
Classes related to input/output.
|
com.compomics.util.nucleotide |
Useful objects for modeling and handling nucleotides.
|
com.compomics.util.protein |
Classes concerning useful Objects and their operations for modeling and handling proteins.
|
Class and Description |
---|
Logger
This interface describes the behaviour for a class that can log messages.
|
SpectrumFile
This interface describes the behaviour for a spectrum file
(ie., PKL file, Mascot Generic file, dat file, ...).
|
Class and Description |
---|
Flamable
This interface describes the behaviour for classes that can handle unrecoverable errors and
exceptions, thrown by child threads etc.
|
Class and Description |
---|
SpectrumFile
This interface describes the behaviour for a spectrum file
(ie., PKL file, Mascot Generic file, dat file, ...).
|
Class and Description |
---|
Connectable
This interface describes the behaviour for classes that can accept an
incoming DB connection.
|
Class and Description |
---|
Monitorable
This interface describes the behaviour for any Object whose progressing state
can be monitored.
|
Class and Description |
---|
Sequence
This interface defines the default behavior of any kind of
sequence with a certain mass - be it DNA, protein or something
else.
|
Class and Description |
---|
Modification
This interface describes the behaviour for a modification on a peptide or aminoacid sequence.
|
Sequence
This interface defines the default behavior of any kind of
sequence with a certain mass - be it DNA, protein or something
else.
|
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